Feature Scores

Description

• Phenotype score: summarizes the phenotype information: assign the highest determined score (fold-change or coefficient); else, assign zero. The higher the phenotype score, the more likely it is that the feature is indeed phenotype-associated. For the Qualitative Phenotype Module, the score is the fold-change that was determined, while for the Quantitative-Percentage and the Quantitative-Concentration, it is the maximum coefficient score that was found across all assays.
• Novelty score: summarizes annotation information: if the feature had any library match using one of the algorithms, subtract the highest determined score from one; else, assign zero. The higher the novelty score, the more likely that the molecule is yet unknown.